Is bedtools safe to use?

bedtools has no known vulnerabilities on the latest version (2.31.1). DepScope rates its health at 56/100 (high risk).

What is the latest version of bedtools?

The latest version of bedtools is 2.31.1, released 2026-02-08.

No known vulnerabilities on the latest version of bedtools.

No, bedtools is actively maintained. Latest release: 2.31.1 (2026-02-08).

DepScope has no curated alternatives for bedtools at this time.

bedtools is licensed under MIT.

homebrewv2.31.1

Tools for genome arithmetic (set theory on the genome)

License MITpermissive1 versions1 maintainers1 deps30 weekly dl

/ 100

Health

safe to use

[email protected] is safe to use (health: 56/100)

Health breakdown0 – 100

15/25

maintenance

0/20

popularity

25/25

security

9/15

maturity

7/15

community

Vulnerabilities

none known

Dependencies (1)

API access

Get this data programmatically — free, no authentication.

curl https://depscope.dev/api/check/homebrew/bedtools

Last updated · 2026-02-08T14:50:35Z