pagoda2

cranv1.0.15

Single Cell Analysis and Differential Expression. Analyzing and interactively exploring large-scale single-cell RNA-seq datasets. 'pagoda2' primarily performs normalization and differential gene expression analysis, with an interactive application for exploring single-cell RNA-seq datasets. It performs basic tasks such as cell size normalization, g

License GPL-3strong copyleft0 versions1 maintainers27 deps260 weekly dl
kharchenkolab/pagoda2
55
/ 100
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safe to use

[email protected] is safe to use (health: 55/100)

Health breakdown0 – 100
25/25
maintenance
3/20
popularity
25/25
security
0/15
maturity
2/15
community
Vulnerabilities
0
none known

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Dependency Tree

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Dependencies (27)
MatrixigraphdendsortdratfastclustergraphicsgrDevicesirlbamagrittrMASSmgcvmethodsN2RparallelplyrR.utilsRcpprjsonrlangR6RMTstatRookRtsnesccorestatsurltoolsutils
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First published · 2026-03-31 23:04:41

Last updated · 2026-03-31T21:40:06+00:00