PlasmaMutationDetector

cranv1.7.2

Tumor Mutation Detection in Plasma. Aims at detecting single nucleotide variation (SNV) and insertion/deletion (INDEL) in circulating tumor DNA (ctDNA), used as a surrogate marker for tumor, at each base position of an Next Generation Sequencing (NGS) analysis. Mutations are assessed by comparing the minor-allele frequency at each pos

License MIT + file LICENSE0 versions1 maintainers9 deps57 weekly dl
https://CRAN.R-project.org/package=PlasmaMutationDetector
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2/15
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Dependencies (9)
ggplot2gridGenomicRangesVariantAnnotationS4VectorsRsamtoolsrtracklayerrobustbaseSummarizedExperiment
API access

Get this data programmatically — free, no authentication.

curl https://depscope.dev/api/check/cran/PlasmaMutationDetector

First published · 2018-06-11 07:44:40

Last updated · 2018-06-11T06:43:09+00:00