Inference of transmission tree from a dated phylogeny. Includes methods to simulate and analyse outbreaks. The methodology is described in Didelot et al. (2014) <doi:10.1093/molbev/msu121>, Didelot et al. (2017) <doi:10.1093/molbev/msw275>.
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curl https://depscope.dev/api/check/conda/r-transphyloFirst published · 2020-06-12 14:35:43.580000+00:00
Last updated · 2025-09-21 15:43:26.355000+00:00