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depscope/conda/r-supercell

r-supercell

condav1.1

Aggregates large single-cell data into metacell dataset by merging together gene expression of very similar cells. 'SuperCell' uses 'velocyto.R' <doi:10.1038/s41586-018-0414-6> <https://github.com/velocyto-team/velocyto.R> for RNA velocity and 'WeightedCluster' <doi:10.12682/lives.2296-1658.2013.24> <https://mephisto.unige.ch/weightedcluster/> for weighted clustering on metacells. We also recommend installing 'scater' Bioconductor package <doi:10.18129/B9.bioc.scater> <https://bioconductor.org/packages/release/bioc/html/scater.html>.

License GPL-3.0-only1 versions1 maintainers0 deps38 weekly dl
47
/ 100
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safe to use

[email protected] is safe to use (health: 47/100)

Health breakdown0 – 100
20/25
maintenance
0/20
popularity
25/25
security
0/15
maturity
2/15
community
Vulnerabilities
0
none known

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First published · 2026-03-14 22:42:43.390000+00:00

Last updated · 2026-03-14 22:42:56.851000+00:00

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