r-sctransform

condav0.4.3

A normalization method for single-cell UMI count data using a variance stabilizing transformation. The transformation is based on a negative binomial regression model with regularized parameters. As part of the same regression framework, this package also provides functions for batch correction, and data correction. See Hafemeister and Satija 2019 <doi:10.1101/576827> for more details.

License GPL-3.0-only12 versions1 maintainers0 deps1,113 weekly dl
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15/25
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6/20
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25/25
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12/15
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2/15
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First published · 2020-09-20 16:18:25.690000+00:00

Last updated · 2026-01-10 13:43:56.004000+00:00