r-pqlseq

condav1.2.1

An efficient tool designed for differential analysis of large-scale RNA sequencing (RNAseq) data and Bisulfite sequencing (BSseq) data in the presence of individual relatedness and population structure. 'PQLseq' first fits a Generalized Linear Mixed Model (GLMM) with adjusted covariates, predictor of interest and random effects to account for population structure and individual relatedness, and then performs Wald tests for each gene in RNAseq or site in BSseq.

License GPL-2.0-or-later1 versions1 maintainers0 deps70 weekly dl
43
/ 100
Health
safe to use

[email protected] is safe to use (health: 43/100)

Health breakdown0 – 100
10/25
maintenance
0/20
popularity
25/25
security
6/15
maturity
2/15
community
Vulnerabilities
0
none known

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First published · 2025-04-14 10:35:34.749000+00:00

Last updated · 2025-09-27 12:28:12.344000+00:00

r-pqlseq — Health Score 43/100 | DepScope