Provides quality control (QC), normalization, and batch effect correction operations for 'NanoString nCounter' data, Talhouk et al. (2016) <doi:10.1371/journal.pone.0153844>. Various metrics are used to determine which samples passed or failed QC. Gene expression should first be normalized to housekeeping genes, before a reference-based approach is used to adjust for batch effects. Raw NanoString data can be imported in the form of Reporter Code Count (RCC) files.
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curl https://depscope.dev/api/check/conda/r-nanostringrFirst published · 2020-12-05 19:31:11.324000+00:00
Last updated · 2025-10-03 00:45:52.443000+00:00